Finetuning and Active Learning
Generate antibodies optimized for a given property
Gruver et. al
SaProt finetuning
Su et. al
Protein sequence property prediction finetuning
Schmirler et. al
Protein-ligand binding affinity prediction finetuning
Gorantla et. al
Generate ESM2 Embeddings
Lin et. al
Generate Prot T5 Embeddings
Elnaggar et. al
ML-assisted Directed Evolution
J. Funk et. al
Tools for training neural networks on MAVE datasets and running MCMC simulations
Durumeric et. al
Model-guided directed evolution workflow for multi-mutant nomination and assembly design
Tran et. al