Batch Workflows

Job Name

All file upload, protein sequence, or SMILES fields support batch inputs. If your tool has multiple batch fields, select whether you want to pair them 1:1 or to iterate through all pairwise combinations.

Enable sweeping over combinations of dropdown/number fields parameters

Select Tool

AlphaFold Batch Submission

Each fasta file contains one job/complex

Sequence Batch

Protein amino acid sequence, use : to separate chains for multimers

View Optional Settings

Number of Models

MSA Mode

Number of recycles

[0, 20]

Number of models to relax

[0, 5]

Pair Mode

Use PDB 100 Templates

Random seed

Max MSA

Recycle Early Stop Tolerance

Score with IPSAE

Use dropout

Submit 1 job

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