Finetuning and Active Learning
Generate antibodies optimized for a given property
Gruver et. al
SaProt finetuning
Su et. al
Protein sequence property prediction finetuning
Schmirler et. al
Protein-ligand binding affinity prediction finetuning
Gorantla et. al
Generate ESM2 Embeddings
Lin et. al
Generate Prot T5 Embeddings
Elnaggar et. al
ML-assisted Directed Evolution
J. Funk et. al
Finetune generative protein language model
H. Hrbáň and D. Hoksza et. al
Tools for training neural networks on MAVE datasets and running MCMC simulations
Durumeric et. al
Model-guided directed evolution workflow for multi-mutant nomination and assembly design
Tran et. al